eDNAmap
Instruction A Web Tool/Database for Metabarcodes in the Northwestern Pacific and Beyond GitHub
 
 
Status    
Ready.
Mode Mapping only (≈30 seconds) Species list comparison
Setting
Search species
    or enter keywords
    or upload species/ASV list   Example
Site names on map
ASV comparison criteria
Distance method for composition comparison
Generate PDF
Mapping software
 
Species/ASV table
Upload excel file  
Example file .xlsx OTU_Closek19_Ex.xlsx (link),
ASV_KH20-9_KH22-5_Ex.xlsx,
ASV_KH22-5_Ex.xlsx,
ASV_KH20-9_Ex.xlsx,
  .csv species_TEST.csv,
  .txt List_Miya15Kuroshio.txt (link)
   and/or choose projects from the database:
 Sea area Habitat Organism Metabarcoding loci Table Cruise Article
 
Boso Peninsula
Surrounding waters Coast Fish mt12S Species.xlsx — Miya22
Offshore Ocean Fish mt12S ASV.xlsx KS21-8 Lin25
Offshore Ocean Fish mt12S ASV.xlsx KS23-2 Lin25
 
Sanriku
Off Sanriku Ocean Fish mt12S ASV.xlsx KS22-7 Lin25
Off Joban Ocean Fish mt12S ASV.xlsx KS21-3 Lin25
Otsuchi Bay Ocean Fish mt12S ASV.xlsx KS21-24 Lin25
Otsuchi Bay Ocean Fish mt12S ASV.xlsx KS22-11 Lin25
 
Sea of Japan
West Ocean Fish mt12S OTU.xlsx:1,2 KS20-13 Lin25
Tsushima Islands Ocean Fish mt12S ASV.xlsx KS21-12 Lin25
 
Kuroshio Current
Extension Ocean Fish mt12S OTU.xlsx:1, 2 KS18-05 Yu22
Axis Ocean Fish mt12S ASV.xlsx KH20-09 Inoue25
  Ocean Dinoflagellate 18S V4 Species.xlsx KH20-09 Wu24
Off Shikoku Ocean Fish mt12S ASV.xlsx KS21-11 Lin25
 
Tokara
Tokara Str. Ocean Fish mt12S ASV.xlsx KH22-5 Inoue25
West of Yakushima Island Ocean Fish mt12S ASV.xlsx KS22-15 Lin25
Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-1 Lin25
Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-3 Lin25
Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-4 Lin25
 
Okinawa
Okinawa Is. Reef Coral mt12S Genus.xlsx — Nishitsuji23
Bise Reef Coral mt12S Genus.xlsx — Shinzato21
  Reef Fish mt12S Species.xlsx — Oka20
 
Tsushima Current
Korea Str. Ocean Fish mt12S Species.xlsx — Kim22
 
NW pacific
Chukchi Sea Ocean Fish mt12S Species.xlsx — Kawakami23
NW pacific Ocean Fish mt12S ASV.xlsx KH23-2 Lin25
 
North Sea
Belgian side Coast Fish mt12S Species.xlsx — Dukan24
 
Central Pacific
Palmyra Atoll Reef Fish 18S,mt12S,CO1 OTU.xlsx — Lafferty20
 
Timor Sea
Browse Island Reef Fish mt16S Species.xlsx — Bessey20
 
Eastern Pacific
Monterey Bay Coast Fish mt12S Species.xlsx — Closek19
 
Caution: When comparing species/ASV compositions across different projects, be aware that calculated similarities may be biased due to methodological differences, such as primer selection, laboratory protocols, and bioinformatics pipelines.
2 Mar. 2026: ver.1.0.2 jinoueATg.ecc.u-tokyo.ac.jp Flask in viento